PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36993.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 435aa    MW: 46573.4 Da    PI: 6.2754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36993.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-10278326355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  KHN36993.1 278 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 326
                 58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.61E-11273330No hitNo description
SuperFamilySSF474596.02E-17273343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485275325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16276343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-7278326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10281331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MGGQENAMGG FQHGNESILT CPPTSGLSGP NVNVSEMAIS SVSMAKPSNV VANPFLASST  60
WDPLVSLSQA QTFGGSSMVS HNEFVNANSS YPLVLDNQGG ISNTSHLVQY MSDSNLGGIV  120
PKVHSYASGG FSEMVGSGSF CQHGSGDMAD TGYPTHYNPI KEAPIINGEQ SQVEDSIPEE  180
EAPGSAPSGN RRKRGLDHNS TFSPNKNAEG DAVKDSPGKA SDGSKEHEKR PKVEQNNGAD  240
VRGKQSVKQA KDNNNSQSGE APKENFIHVR ARRGQATNSH SLAERVRREK ISERMRLLQE  300
LVPGCNKITG KAVMLDEIIN YVQSLQQQVE FLSMKLATVN PELNFDVDRI LSKDILQSRI  360
GHGIGAYGPG INSSHTFPNG SFHGTLAGMS STSSQFPPLP QNVLDHEFQS FYGIGYDSNT  420
ALDNLGPNGR LKTEL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003556954.10.0PREDICTED: transcription factor bHLH74-like
TrEMBLA0A0B2RX070.0A0A0B2RX07_GLYSO; Transcription factor bHLH74
TrEMBLK7K0S80.0K7K0S8_SOYBN; Uncharacterized protein
STRINGGLYMA0041S00210.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-80bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]